SCARNA5: snoID_0597

Download: FA Profile

Name:SCARNA5
ID:snoID_0597
Chr:chr2
Strand:+
Gene start:234184372
Gene end:234184649
Expression start:234184373
Expression_end:234184649
Alias name:SCARNA5
Type:Hybrid
Source:HUGO
Expression:152187
Host gene:ATG16L1
overlapping gene:SCARNA5
Rfam IDRF00478
p-value:5.3e-43
RNA family name:SCARNA6
RNA family:Small Cajal body specific RNA 6
comment:
Conservation:Vertebrates
Sequence:AGGTCGATGATGATTGGTAAAAGGTCTGATTGCACTGAATGTCACGGTCCCTTTGTTGCCCTCAACTCCCAGCAGCCCATTTTTTCCCTCCCGTCACATTTAAGTCATGTGTATGGGATCATGGAGCAGCTGATAATTTGGGATTCTGTCAGTGTGTGTTTCTGAGAGTGATCGGCTCACAGCTGACGAGTATCCAACAAAACCAGTTACACAGGAGACTGACGAGTGGCAGTCATGGGTGTGATGGTGCATGATCTCAAGTTTTCAATCTGAGACCT
Boxes:ATGATCT_251_CTGA_26_ATGATGA_7_CTGA_270
Reported1 (R):U5-39
Human1 (H):U5.1-39
Conserved1 (C):U5.1-39
Selected1:RCH:U5.1-39
ICI11.01
special1
Reported2 (R):-
Human2 (H):28S-4164
Conserved2 (C):18S-595
Selected2:C:18S-595
ICI20.39
special2
Reported3 (R):-
Human3 (H):28S-1307
Conserved3 (C):18S-1530
Selected3:C:18S-1530
ICI30.49
special3
Reported4 (R):U4-65
Human4 (H):U4.1-65
Conserved4 (C):U4.1-65
Selected4:RCH:U4.1-65
ICI40.96
special4